Quantitative Microscopy, Effortlessly Automated
Cytely transforms your microscope into an intelligent, autonomous system. Go from sample to publication-ready results faster, with higher quality and unparalleled ease. Powered by Data-Driven Microscopy.
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Setup in Minutes, Not Weeks
Forget complex parameter tuning and building analysis pipelines. Cytely automatically identifies the cells and objects in your sample with minimal...
Explore Instantly & Interactively
Cytely goes beyond data collection—it turns complex image data into immediate insight. Once analysis is complete, you're presented with a fully...
Your Microscope, Enhanced by Cytely
Continue using your existing microscope setup. Cytely integrates seamlessly into your imaging workflow: scan broadly, upload your data, and let Cytely...
Close the Loop with Smart Microscopy
Identify populations of interest through gating and send their coordinates back to the microscope for high-resolution or multi-modal follow-up...
Cytely Advantage
Built for Spatial Single-Cell Discovery
Cytely analyzes individual cells and objects at true single-cell resolution, retaining spatial and subcellular context. This is essential for studying...
Seamless Segmentation
Cytely's robust segmentation is powered by pre-trained AI, automatically identifying and profiling cells, debris, and subcellular structures. No...
Gating and Visual Analysis, Together
Dive deeper into your data with an image flow cytometry-like experience using data from the initial DIA scan. Plot any measured morphological or...
Shareable, Reproducible, Ready to Publish
Cytely lets you share complete experiments—raw data, gates, images, and plots—in a single secure link. Collaborators can explore data interactively...
Ready-to-Go Assays
Specialized workflows designed for common research applications
Rapid Cell Count & Classification
Cytely enables fast quantification of cell populations and contaminants based on morphology and...
Transfection Efficiency Analysis
Identify transfected cells based on intensity thresholds, co-localization, or nuclear vs cytosolic...
And More…
From co-culture assays to rare cell detection, Cytely supports flexible, user-defined workflows...
See Cytely in Action
Explore a High-Resolution Phagocytosis Dataset
See Cytely in action with real phagocytosis data. Interact with the analysis, explore gating, and see how Data-Driven Microscopy works.
Explore Interactive DatasetScientific Foundation: Data-Driven Microscopy
Learn about the scientific principles behind Cytely's approach to automated microscopy and analysis.
Cell Rep Methods. 2023 Mar 6;3(3):100419. doi: 10.1016/j.crmeth.2023.100419.
Data-driven microscopy allows for automated context-specific acquisition of high-fidelity image data.
Oscar André, Johannes Kumra Ahnlide, Nils Norlin, Vinay Swaminathan, Pontus Nordenfelt.
Read Full Paper (PMC10088093)Ready to Transform Your Microscopy?
Join researchers worldwide who are accelerating their discoveries with Cytely's intelligent microscopy platform.