If you are publishing data analyzed with Cytely, we recommend including a Workflow Description and a Dataset in your Methods section.
- Workflow Description: Briefly describe the image analysis workflow and data analysis strategy, specifying the algorithms used for segmentation and how filtering/gating was performed.
- Dataset Link: To maximize transparency and reproducibility, we encourage you to provide a read-only Share Link to a representative dataset.
You can generate a secure Share Link for your dataset by clicking Share in the Data Explorer. Recipients can open the Data Explorer to view your gates, click on plots, and inspect the raw cell images themselves. They cannot alter your data, but they can verify your conclusions and even replicate your analysis pipeline.
See an example shared dataset here: https://app.cytely.io/essential/c4a8fe20-e879-47db-b202-e790c0e5fb14/results/shared
